{"id":2991,"date":"2026-03-06T23:02:39","date_gmt":"2026-03-06T15:02:39","guid":{"rendered":"http:\/\/www.majunpeng.com\/?p=2991"},"modified":"2026-03-07T00:30:19","modified_gmt":"2026-03-06T16:30:19","slug":"syri%ef%bc%9a%e5%9f%ba%e4%ba%8e%e5%9f%ba%e5%9b%a0%e7%bb%84%e7%9a%84%e7%bb%93%e6%9e%84%e5%8f%98%e5%bc%82%e6%a3%80%e6%b5%8b%e6%9c%80%e4%bc%98%e9%80%89","status":"publish","type":"post","link":"http:\/\/www.majunpeng.com\/index.php\/2026\/03\/06\/syri%ef%bc%9a%e5%9f%ba%e4%ba%8e%e5%9f%ba%e5%9b%a0%e7%bb%84%e7%9a%84%e7%bb%93%e6%9e%84%e5%8f%98%e5%bc%82%e6%a3%80%e6%b5%8b%e6%9c%80%e4%bc%98%e9%80%89\/","title":{"rendered":"SYRI\uff1a\u57fa\u4e8e\u57fa\u56e0\u7ec4\u7684\u7ed3\u6784\u53d8\u5f02\u68c0\u6d4b\u6700\u4f18\u9009"},"content":{"rendered":"\t\t<div data-elementor-type=\"wp-post\" data-elementor-id=\"2991\" class=\"elementor elementor-2991\" data-elementor-post-type=\"post\">\n\t\t\t\t<div class=\"elementor-element elementor-element-0fc7767 e-con-full e-flex e-con e-parent\" data-id=\"0fc7767\" data-element_type=\"container\" data-e-type=\"container\">\n\t\t\t\t<div class=\"elementor-element elementor-element-5aa8fac elementor-widget elementor-widget-heading\" data-id=\"5aa8fac\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">\u5f15\u8a00<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-182bbe0 elementor-widget elementor-widget-text-editor\" data-id=\"182bbe0\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p data-start=\"68\" data-end=\"239\">\u5728\u57fa\u56e0\u7ec4\u7814\u7a76\u4e2d\uff0c\u5355\u6838\u82f7\u9178\u591a\u6001\u6027\uff08SNP\uff09\u957f\u671f\u88ab\u89c6\u4e3a\u9057\u4f20\u53d8\u5f02\u7684\u6838\u5fc3\u6307\u6807\u3002\u7136\u800c\uff0c\u57fa\u56e0\u7ec4\u4e0d\u4ec5\u4ec5\u662f\u7531\u4e00\u4e2a\u4e2a\u5355\u70b9\u78b1\u57fa\u7ec4\u6210\uff0c\u66f4\u5305\u542b\u5927\u89c4\u6a21\u7684\u7ed3\u6784\u53d8\u5f02\uff08Structural Variants, SVs\uff09\uff0c\u5982\u5927\u7247\u6bb5\u7f3a\u5931\u3001\u63d2\u5165\u3001\u5012\u4f4d\u548c\u6613\u4f4d\u7b49\u3002\u8fd9\u7c7b\u53d8\u5f02\u5e38\u5e38\u5bf9\u57fa\u56e0\u529f\u80fd\u3001\u8c03\u63a7\u7f51\u7edc\u4ee5\u53ca\u6027\u72b6\u5f62\u6210\u5177\u6709\u6df1\u8fdc\u5f71\u54cd\uff0c\u4f46\u7531\u4e8e\u6280\u672f\u548c\u5206\u6790\u65b9\u6cd5\u7684\u9650\u5236\uff0c\u5f80\u5f80\u88ab\u4f20\u7edf SNP \u5206\u6790\u5ffd\u7565\u3002<\/p><p data-start=\"241\" data-end=\"408\">SyRI\uff08Synteny and Rearrangement Identifier\uff09\u662f\u4e00\u6b3e\u4e13\u95e8\u7528\u4e8e\u57fa\u56e0\u7ec4\u7ed3\u6784\u53d8\u5f02\u68c0\u6d4b\u7684\u5de5\u5177\uff0c\u5b83\u80fd\u591f\u5728\u5168\u57fa\u56e0\u7ec4\u5c3a\u5ea6\u4e0a\u8bc6\u522b\u5e8f\u5217\u91cd\u6392\u3001\u62f7\u8d1d\u6570\u53d8\u5f02\u548c\u540c\u6e90\u533a\u95f4\u7684\u5dee\u5f02\u3002\u901a\u8fc7\u5bf9\u4e24\u6761\u6216\u591a\u6761\u57fa\u56e0\u7ec4\u8fdb\u884c\u6bd4\u5bf9\uff0cSyRI \u4e0d\u4ec5\u53ef\u4ee5\u7cbe\u786e\u5b9a\u4f4d\u7ed3\u6784\u53d8\u5f02\u7684\u4f4d\u7f6e\uff0c\u8fd8\u80fd\u63ed\u793a\u53d8\u5f02\u7c7b\u578b\u548c\u5f71\u54cd\u8303\u56f4\uff0c\u4e3a\u6df1\u5165\u7406\u89e3\u57fa\u56e0\u7ec4\u6f14\u5316\u548c\u529f\u80fd\u63d0\u4f9b\u53ef\u9760\u6570\u636e\u3002<\/p><p data-start=\"410\" data-end=\"508\">\u5982\u679c\u4f60\u60f3\u7a81\u7834 SNP \u5206\u6790\u7684\u5c40\u9650\uff0c\u5168\u9762\u6355\u6349\u57fa\u56e0\u7ec4\u4e2d\u7684\u201c\u5927\u52a8\u4f5c\u201d\uff0cSyRI \u65e0\u7591\u662f\u6700\u503c\u5f97\u638c\u63e1\u7684\u5de5\u5177\u4e4b\u4e00\u3002\u672c\u7bc7\u6587\u7ae0\u5c06\u4ece SyRI \u7684\u6838\u5fc3\u539f\u7406\u51fa\u53d1\uff0c\u7ed3\u5408\u5b9e\u9645\u64cd\u4f5c\u793a\u4f8b\uff0c\u5e26\u4f60\u5feb\u901f\u4e0a\u624b\u7ed3\u6784\u53d8\u5f02\u7684\u5168\u57fa\u56e0\u7ec4\u5206\u6790\u3002<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-5bbadc0 elementor-widget elementor-widget-heading\" data-id=\"5bbadc0\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">SYRI<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-011f76d elementor-widget elementor-widget-text-editor\" data-id=\"011f76d\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>SYRI\u4e3b\u8981\u662f\u901a\u8fc7\u57fa\u56e0\u7ec4 VS \u57fa\u56e0\u7ec4\u7684\u6bd4\u5bf9\u6587\u4ef6\uff0c\u9274\u5b9aSV\uff0c\u5e76\u4e14\u53ef\u4ee5\u914d\u5408\u4e0b\u6e38\u7684Plotsr\u7ed8\u5236\u7ed3\u6784\u53d8\u5f02\u56fe\u3002<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-002a686 elementor-widget elementor-widget-heading\" data-id=\"002a686\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h3 class=\"elementor-heading-title elementor-size-default\">\u5b89\u88c5<\/h3>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-56f0c5d elementor-widget elementor-widget-code-highlight\" data-id=\"56f0c5d\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-javascript line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-javascript\">\n\t\t\t\t\t<xmp>mamba install bioconda::syri\nmamba install bioconda::plotsr<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-c927c05 elementor-widget elementor-widget-heading\" data-id=\"c927c05\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h3 class=\"elementor-heading-title elementor-size-default\">\u5168\u57fa\u56e0\u7ec4\u6bd4\u5bf9<\/h3>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-ef65382 elementor-widget elementor-widget-text-editor\" data-id=\"ef65382\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>\u8981\u4f7f\u7528SYRI\u8fdb\u884cSV\u68c0\u6d4b\uff0c\u7b2c\u4e00\u6b65\u8fdb\u884c\u57fa\u56e0\u5168\u57fa\u56e0\u7ec4\u6bd4\u5bf9\u3002<strong>\u8fd9\u91cc\u9700\u8981\u6ce8\u610f\u7684\u662f\uff0c\u6bd4\u5bf9\u7684\u4e24\u4e2a\u57fa\u56e0\u7ec4\u7684\u540c\u6e90\u67d3\u8272\u4f53ID\u5fc5\u987b\u662f\u4e00\u81f4\u7684\uff0c\u5e76\u4e14\u65b9\u5411\u4e5f\u8981\u662f\u76f8\u540c\u7684\u3002\u4e3e\u4e2a\u4f8b\u5b50\uff0c\u53c2\u8003\u57fa\u56e0\u7ec4A\u76841\u53f7\u67d3\u8272\u4f53\u662fChr01\uff0c\u90a3\u4e48Query\u57fa\u56e0\u7ec4\u76841\u53f7\u67d3\u8272\u4f53\u4e5f\u5fc5\u987b\u662fChr01\u3002<\/strong>\u6211\u81ea\u5df1\u5199\u4e86\u4e00\u4e2a\u811a\u672c\uff0c\u901a\u8fc7\u6bd4\u5bf9\u4ea7\u751f\u7684paf\u6587\u4ef6\uff0c\u8fdb\u884c\u540c\u6e90\u67d3\u8272\u4f53ID\u7684\u66ff\u6362\u548c\u65b9\u5411\u7684\u8c03\u6574\u3002\u5982\u679c\u9700\u8981\uff0c\u52a0\u6211\u5fae\u4fe1\u6211\u53d1\u4f60\u3002<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-17b60ed elementor-widget elementor-widget-text-editor\" data-id=\"17b60ed\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>\u5168\u57fa\u56e0\u7ec4\u6bd4\u5bf9<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-09f8de1 elementor-widget elementor-widget-code-highlight\" data-id=\"09f8de1\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-javascript line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-javascript\">\n\t\t\t\t\t<xmp>mm2plus -t 20 -x asm20 -c -eqx -secondary=no 97103_genome_v2.5.fa XG0378_genome.fa > mm2plus.paf<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-bf7e3f8 elementor-widget elementor-widget-text-editor\" data-id=\"bf7e3f8\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>\u57fa\u4e8e\u6bd4\u5bf9\u7684\u7ed3\u679c\uff0c\u66ff\u6362Query\u57fa\u56e0\u7ec4\u7684\u540c\u6e90\u67d3\u8272\u4f53ID\uff0c\u5e76\u7edf\u4e00\u5e8f\u5217\u7684\u65b9\u5411<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-468a67d elementor-widget elementor-widget-code-highlight\" data-id=\"468a67d\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-javascript line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-javascript\">\n\t\t\t\t\t<xmp>python3 ~\/Script\/syri\/rename_chromosomes_by_paf_1.py -p mm2plus.paf -f XG0378_genome.fa -o Rename_XG0378_genome.fa<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-cf6c6ee elementor-widget elementor-widget-text-editor\" data-id=\"cf6c6ee\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>\u518d\u6b21\u8fdb\u884c\u5168\u57fa\u56e0\u7ec4\u6bd4\u5bf9<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-8488bce elementor-widget elementor-widget-code-highlight\" data-id=\"8488bce\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-javascript line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-javascript\">\n\t\t\t\t\t<xmp>mm2plus -ax asm5 -t 20 --eqx 97103_genome_v2.5_chr.genome.fasta Rename_XG0378_genome.fa > out.sam<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-1c39090 elementor-widget elementor-widget-heading\" data-id=\"1c39090\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h3 class=\"elementor-heading-title elementor-size-default\">SYRI\u9274\u5b9aSV<\/h3>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-4dc875b elementor-widget elementor-widget-code-highlight\" data-id=\"4dc875b\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-javascript line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-javascript\">\n\t\t\t\t\t<xmp>syri -c out.sam -r 97103_genome_v2.5_chr.genome.fasta -q Rename_XG0378_genome.fa -k -F S --nc 20 --prefix syri_\r\n\r\n# -c \u5168\u57fa\u56e0\u7ec4\u6bd4\u5bf9\u7ed3\u679c\r\n# -r \u53c2\u8003\u57fa\u56e0\u7ec4\r\n# -q query\u57fa\u56e0\u7ec4\r\n# -k \u4fdd\u7559\u8fc7\u7a0b\u6587\u4ef6\r\n# -F \u8f93\u5165\u6587\u4ef6\u7c7b\u578b\uff0c\u8fd9\u91cc\u6307\u5b9a\u4e3asam\u6587\u4ef6\r\n# --nc cpu\u6570\u91cf\r\n# --prefix  \u8f93\u51fa\u6587\u4ef6\u524d\u7f00<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-df8fe9d elementor-widget elementor-widget-text-editor\" data-id=\"df8fe9d\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>\u6700\u91cd\u8981\u7684\u8f93\u51fa\u6587\u4ef6\u662fsyri_syri.out\u6587\u4ef6\uff0c\u8bb0\u5f55\u4e86\u6bcf\u4e2aSV\u7684\u7c7b\u578b\u548c\u4f4d\u7f6e\u4fe1\u606f\u3002<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-906a1bb elementor-widget elementor-widget-image\" data-id=\"906a1bb\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"image.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<img fetchpriority=\"high\" decoding=\"async\" width=\"1024\" height=\"389\" src=\"http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/ScreenShot_2026-03-06_233201_407-1024x389.png\" class=\"attachment-large size-large wp-image-2999\" alt=\"\" srcset=\"http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/ScreenShot_2026-03-06_233201_407-1024x389.png 1024w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/ScreenShot_2026-03-06_233201_407-300x114.png 300w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/ScreenShot_2026-03-06_233201_407-768x292.png 768w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/ScreenShot_2026-03-06_233201_407.png 1464w\" sizes=\"(max-width: 1024px) 100vw, 1024px\" \/>\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-c55cdc9 elementor-widget elementor-widget-text-editor\" data-id=\"c55cdc9\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>syri_syri.summary\u7edf\u8ba1\u4e86\u6bcf\u79cdSV\u7684\u6570\u91cf\u548c\u957f\u5ea6<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-081a9f7 elementor-widget elementor-widget-image\" data-id=\"081a9f7\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"image.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<img decoding=\"async\" width=\"646\" height=\"489\" src=\"http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/ScreenShot_2026-03-06_233218_294.png\" class=\"attachment-large size-large wp-image-2998\" alt=\"\" srcset=\"http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/ScreenShot_2026-03-06_233218_294.png 646w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/ScreenShot_2026-03-06_233218_294-300x227.png 300w\" sizes=\"(max-width: 646px) 100vw, 646px\" \/>\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-9e75266 elementor-widget elementor-widget-heading\" data-id=\"9e75266\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">Plotsr<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-e8154e3 elementor-widget elementor-widget-text-editor\" data-id=\"e8154e3\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>\u9274\u5b9aSV\u540e\uff0c\u8fd8\u53ef\u4ee5\u7ed8\u5236\u5168\u57fa\u56e0\u7ec4\u7ed3\u6784\u53d8\u5f02\u56fe\uff0c\u9996\u5148\u8981\u5148\u914d\u7f6e\u4e00\u4e2a\u57fa\u56e0\u7ec4\u4fe1\u606f\u6587\u4ef6\uff0c\u8bb0\u5f55\u6bcf\u4e2a\u57fa\u56e0\u7ec4\u7684\u540d\u79f0\u548c\u6587\u4ef6\u4fe1\u606f\u3002\u7b2c\u4e00\u5217\u4e3a\u57fa\u56e0\u7ec4\u6587\u4ef6\u540d\uff0c\u7b2c\u4e8c\u5217\u4e3a\u57fa\u56e0\u7ec4\u540d\u79f0\uff0c\u7b2c\u4e09\u5217\u4e3a\u4e00\u4e9b\u914d\u7f6e\u4fe1\u606f\u3002<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-fc62b42 elementor-widget elementor-widget-code-highlight\" data-id=\"fc62b42\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-javascript line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-javascript\">\n\t\t\t\t\t<xmp>97103_genome_v2.5_chr.genome.fasta      97103   lw:1.5\nRename_XG0378_genome.fa XG0378  lw:1.5<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-580d15b elementor-widget elementor-widget-text-editor\" data-id=\"580d15b\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>\u7ed8\u56fe<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-a7f87dd elementor-widget elementor-widget-code-highlight\" data-id=\"a7f87dd\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-javascript line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-javascript\">\n\t\t\t\t\t<xmp>plotsr --sr syri_syri.out --genomes genome.txt -o output_plot.png -H 8 -W 4\r\n\r\n# --sr syri\u7684.out\u8f93\u51fa\u7ed3\u679c\r\n# --genomes \u57fa\u56e0\u7ec4\u4fe1\u606f\u6587\u4ef6\r\n# -o \u8f93\u51fa\u7ed3\u679c\u56fe\u7247\r\n# -H \u56fe\u7247\u7684\u9ad8\u5ea6\r\n# -W \u56fe\u7247\u7684\u5bbd\u5ea6<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-55b827b elementor-widget elementor-widget-image\" data-id=\"55b827b\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"image.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<img decoding=\"async\" width=\"557\" height=\"1024\" src=\"http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-557x1024.png\" class=\"attachment-large size-large wp-image-3000\" alt=\"\" srcset=\"http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-557x1024.png 557w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-163x300.png 163w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-768x1413.png 768w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-835x1536.png 835w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-1113x2048.png 1113w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot.png 1152w\" sizes=\"(max-width: 557px) 100vw, 557px\" \/>\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-8309827 elementor-widget elementor-widget-text-editor\" data-id=\"8309827\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>\u8fd8\u53ef\u4ee5\u7ed8\u5236\u5c40\u90e8\u533a\u57df<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-c0e7b1a elementor-widget elementor-widget-code-highlight\" data-id=\"c0e7b1a\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-javascript line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-javascript\">\n\t\t\t\t\t<xmp>plotsr --sr syri_syri.out --genomes genome.txt -o output_plot.png -H 4 -W 4 --reg 97103:Cla97Chr02:7000000-7500000<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-05c8c33 elementor-widget elementor-widget-image\" data-id=\"05c8c33\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"image.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<img loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"1022\" src=\"http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-1-1024x1022.png\" class=\"attachment-large size-large wp-image-3001\" alt=\"\" srcset=\"http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-1-1024x1022.png 1024w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-1-300x300.png 300w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-1-150x150.png 150w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-1-768x767.png 768w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-1.png 1152w\" sizes=\"(max-width: 1024px) 100vw, 1024px\" \/>\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-5560bf6 elementor-widget elementor-widget-text-editor\" data-id=\"5560bf6\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>\u8fd8\u53ef\u4ee5\u5728\u57fa\u56e0\u7ec4\u7684\u4efb\u4f55\u4f4d\u7f6e\uff0c\u52a0\u4e0a\u5404\u79cd\u6807\u8bb0\uff0c\u914d\u7f6e\u4e00\u4e2a\u6807\u8bb0\u4fe1\u606f\u6587\u4ef6\u3002<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-b01743f elementor-widget elementor-widget-code-highlight\" data-id=\"b01743f\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-javascript line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-javascript\">\n\t\t\t\t\t<xmp>#chr\tstart\tend genome_id\ttags\nCla97Chr02        7104444 7173464 97103   mt:v;mc:black;ms:3;tt:Inversion 1;tp:0.02;ts:8;tf:Arial;tc:black<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-196d893 elementor-widget elementor-widget-code-highlight\" data-id=\"196d893\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-javascript line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-javascript\">\n\t\t\t\t\t<xmp>plotsr --sr syri_syri.out --genomes genome.txt -o output_plot.png -H 4 -W 4 --reg 97103:Cla97Chr02:7000000-8000000 --markers markers.bed<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-f2558bb elementor-widget elementor-widget-image\" data-id=\"f2558bb\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"image.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<img loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"1022\" src=\"http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-3-1024x1022.png\" class=\"attachment-large size-large wp-image-3006\" alt=\"\" srcset=\"http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-3-1024x1022.png 1024w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-3-300x300.png 300w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-3-150x150.png 150w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-3-768x767.png 768w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-3.png 1152w\" sizes=\"(max-width: 1024px) 100vw, 1024px\" \/>\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-20bca98 elementor-widget elementor-widget-text-editor\" data-id=\"20bca98\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>\u4f7f\u7528\u4e24\u79cd\u4e0d\u540c\u7684\u6807\u8bb0\uff0c\u6807\u8bb0\u4e24\u4e2a\u5012\u4f4d\u3002<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-c95779e elementor-widget elementor-widget-code-highlight\" data-id=\"c95779e\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-javascript line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-javascript\">\n\t\t\t\t\t<xmp>#chr\tstart\tend genome_id\ttags\nCla97Chr02      7104444 7173464 97103   mt:v;mc:black;ms:3;tt:Inversion 1;tp:0.02;ts:8;tf:Arial;tc:black\nCla97Chr02      7923535 7957505 97103   mt:o;mc:black;ms:3;tt:Inversion 2;tp:0.02;ts:8;tf:Arial;tc:red<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-bbbe667 elementor-widget elementor-widget-code-highlight\" data-id=\"bbbe667\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-javascript line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-javascript\">\n\t\t\t\t\t<xmp>plotsr --sr syri_syri.out --genomes genome.txt -o output_plot.png -H 4 -W 4 --reg 97103:Cla97Chr02:7000000-8000000 --markers markers.bed<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-b1e4c50 elementor-widget elementor-widget-image\" data-id=\"b1e4c50\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"image.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<img loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"1022\" src=\"http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-4-1024x1022.png\" class=\"attachment-large size-large wp-image-3011\" alt=\"\" srcset=\"http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-4-1024x1022.png 1024w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-4-300x300.png 300w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-4-150x150.png 150w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-4-768x767.png 768w, http:\/\/www.majunpeng.com\/wp-content\/uploads\/2026\/03\/output_plot-4.png 1152w\" sizes=\"(max-width: 1024px) 100vw, 1024px\" \/>\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-053ee24 elementor-widget elementor-widget-heading\" data-id=\"053ee24\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">\u7ed3\u8bed<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-b3f704c elementor-widget elementor-widget-text-editor\" data-id=\"b3f704c\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>SYRI+Plotsr\u7ec4\u5408\u5176\u5b9e\u6211\u65e9\u5c31\u505a\u8fc7\u4e86\uff0c\u6b63\u597d\u4eca\u5929\u6709\u4e00\u4f4d\u8001\u5e08\u60f3\u505a\u4e00\u4e2aSV\u5206\u6790\uff0c\u770b\u4e00\u4e0b\u4e24\u4e2a\u57fa\u56e0\u7ec4\u6240\u6709\u5012\u4f4d\u7c7b\u578b\u7684SV\u4fe1\u606f\uff0c\u501f\u7740\u8fd9\u4e2a\u673a\u4f1a\u4ecb\u7ecd\u4e00\u4e0b\u8fd9\u4e2a\u6d41\u7a0b\u3002<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-6e4fe2c elementor-widget elementor-widget-heading\" data-id=\"6e4fe2c\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title 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