{"id":1486,"date":"2025-03-20T10:13:12","date_gmt":"2025-03-20T02:13:12","guid":{"rendered":"http:\/\/www.majunpeng.com\/?p=1486"},"modified":"2025-07-28T18:12:01","modified_gmt":"2025-07-28T10:12:01","slug":"sequencetubemap-%e5%8f%af%e8%a7%86%e5%8c%96%e6%b3%9b%e5%9f%ba%e5%9b%a0%e7%bb%84","status":"publish","type":"post","link":"http:\/\/www.majunpeng.com\/index.php\/2025\/03\/20\/sequencetubemap-%e5%8f%af%e8%a7%86%e5%8c%96%e6%b3%9b%e5%9f%ba%e5%9b%a0%e7%bb%84\/","title":{"rendered":"OGDI\u548csequenceTubeMap \u53ef\u89c6\u5316\u6cdb\u57fa\u56e0\u7ec4"},"content":{"rendered":"\t\t<div data-elementor-type=\"wp-post\" data-elementor-id=\"1486\" class=\"elementor elementor-1486\" data-elementor-post-type=\"post\">\n\t\t\t\t<div class=\"elementor-element elementor-element-1ca774b e-flex e-con-boxed e-con e-parent\" data-id=\"1ca774b\" data-element_type=\"container\" data-e-type=\"container\">\n\t\t\t\t\t<div class=\"e-con-inner\">\n\t\t\t\t<div class=\"elementor-element elementor-element-827459c elementor-widget elementor-widget-heading\" data-id=\"827459c\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">1. \u524d\u8a00<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-3d58779 elementor-widget elementor-widget-text-editor\" data-id=\"3d58779\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>\u524d\u9762\u5df2\u7ecf\u4f7f\u7528PGGB\u6784\u5efa\u597d\u4e86\u6cdb\u57fa\u56e0\u7ec4\uff0c\u73b0\u5728\u5e94\u8be5\u8003\u8651\u5982\u4f55\u8fdb\u884c\u53ef\u89c6\u5316\u4e86\uff0c\u5bf9\u6bd4\u4e86\u51e0\u6b3e\u53ef\u89c6\u5316\u7684\u8f6f\u4ef6\uff0c\u6700\u540e\u9009\u62e9\u4e86\u4e24\u6b3e\u8f6f\u4ef6\uff0cOGDI\u548csequenceTubeMap\u53ef\u89c6\u5316\u4e00\u4e0b\u3002<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-3cd9f8e elementor-widget elementor-widget-heading\" data-id=\"3cd9f8e\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">2. \u8f6f\u4ef6\u4e0b\u8f7d<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-f221597 elementor-widget elementor-widget-code-highlight\" data-id=\"f221597\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-bash line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-bash\">\n\t\t\t\t\t<xmp># \u4e0b\u8f7dsequenceTubeMap\ngit clone https:\/\/github.com\/vgteam\/sequenceTubeMap.git\ncd sequenceTubeMap\n# \u8be5\u8f6f\u4ef6\u4f9d\u8d56vg\uff0c\u56e0\u6b64\u8fd8\u8981\u4e0b\u8f7dvg\ncurl -o vg https:\/\/github.com\/vgteam\/vg\/releases\/latest\/download\/vg\nchmod +x vg\n# \u8f6f\u4ef6\u7684\u5b98\u7f51\u58f0\u660e\u8fd8\u8981\u4e0b\u8f7dNodeJS\uff0c\u867d\u7136\u6211\u4e0d\u77e5\u9053\u8fd9\u4e2a\u662f\u4ec0\u4e48\uff0c\u4f46\u662f\u8ddf\u7740\u6d41\u7a0b\u8d70\uff0c\u4e0d\u4f1a\u9519\u7684\ncurl -o- https:\/\/raw.githubusercontent.com\/nvm-sh\/nvm\/v0.40.1\/install.sh | bash\nexport NVM_DIR=\"$([ -z \"${XDG_CONFIG_HOME-}\" ] && printf %s \"${HOME}\/.nvm\" || printf %s \"${XDG_CONFIG_HOME}\/nvm\")\"\n[ -s \"$NVM_DIR\/nvm.sh\" ] && \\. \"$NVM_DIR\/nvm.sh\"\nnvm install\nnvm use\nnpm ci\nnpm run build\nnvm use\n# \u542f\u52a8sequecneTubeMap\nnpm run serve\n# \u968f\u540e\u53ef\u4ee5\u767b\u5f55\u7f51\u7ad9\u8fdb\u884c\u53ef\u89c6\u5316\uff0c\u7f51\u7ad9\u7684\u7f51\u5740\u662f\u662f\u81ea\u5df1\u7684ID\u52a0\u4e0a3001\u7aef\u53e3\u3002\nhttp:\/\/localhost:3001<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-95a4394 elementor-widget elementor-widget-heading\" data-id=\"95a4394\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">3. \u4f7f\u7528<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-4b71063 elementor-widget elementor-widget-text-editor\" data-id=\"4b71063\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>\u6839\u636e\u4f5c\u8005\u7684\u8bf4\u660e\uff0c\u7ed8\u56fe\u7684\u65f6\u5019\u9700\u8981\u7684\u662f.vg\u3001.gbwt\u548c.gam\uff0c\u5176\u4e2dgbwt\u548cgam\u6587\u4ef6\u662f\u53ef\u9009\u7684\u3002<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-f7fbbec elementor-widget elementor-widget-code-highlight\" data-id=\"f7fbbec\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"code-highlight.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"prismjs-okaidia copy-to-clipboard \">\n\t\t\t<pre data-line=\"\" class=\"highlight-height language-bash line-numbers\">\n\t\t\t\t<code readonly=\"true\" class=\"language-bash\">\n\t\t\t\t\t<xmp># gfa\u8f6c\u6362\u4e3avg\nvg convert -t 30 -g -v Combine.fasta.b1c69d8.11fba48.4f40d20.smooth.final.gfa > Combine.fasta.b1c69d8.11fba48.4f40d20.smooth.final.vg\n# \u751f\u6210xg\u7d22\u5f15\uff0cvg\u6587\u4ef6\u7684\u76ee\u5f55\u4e0b\u8fd8\u6709.vcf\u548c.vcf.tbl\uff0c\u8fd8\u4f1a\u751f\u4ea7gbwt\u6587\u4ef6\n~\/Software\/sequenceTubeMap\/scripts\/prepare_vg.sh Combine.fasta.b1c69d8.11fba48.4f40d20.smooth.final.vg<\/xmp>\n\t\t\t\t<\/code>\n\t\t\t<\/pre>\n\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-e6be589 elementor-widget elementor-widget-text-editor\" data-id=\"e6be589\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>\u63a5\u4e0b\u6765\u53ea\u9700\u8981\u628a\u6240\u6709\u9700\u8981\u7528\u5230\u7684\u6587\u4ef6\uff0c\u590d\u5236\u5230Software\/sequenceTubeMap\/exampleData\/\uff0c\u4e5f\u5c31\u662f\u8f6f\u4ef6\u7684\u793a\u4f8b\u6570\u636e\u6587\u4ef6\u5939\u5c31\u53ef\u4ee5\u4e86\u3002<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t","protected":false},"excerpt":{"rendered":"<p>1. \u524d\u8a00 \u524d\u9762\u5df2\u7ecf\u4f7f\u7528PGGB\u6784\u5efa\u597d\u4e86\u6cdb\u57fa\u56e0\u7ec4\uff0c\u73b0\u5728\u5e94\u8be5\u8003\u8651\u5982\u4f55\u8fdb\u884c\u53ef\u89c6\u5316\u4e86\uff0c\u5bf9\u6bd4\u4e86\u51e0\u6b3e\u53ef\u89c6\u5316\u7684\u8f6f\u4ef6\uff0c\u6700\u540e\u9009 &#8230; <a title=\"OGDI\u548csequenceTubeMap \u53ef\u89c6\u5316\u6cdb\u57fa\u56e0\u7ec4\" class=\"read-more\" href=\"http:\/\/www.majunpeng.com\/index.php\/2025\/03\/20\/sequencetubemap-%e5%8f%af%e8%a7%86%e5%8c%96%e6%b3%9b%e5%9f%ba%e5%9b%a0%e7%bb%84\/\" aria-label=\"\u9605\u8bfb OGDI\u548csequenceTubeMap \u53ef\u89c6\u5316\u6cdb\u57fa\u56e0\u7ec4\">\u9605\u8bfb\u66f4\u591a<\/a><\/p>\n","protected":false},"author":1,"featured_media":1487,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"_crdt_document":"","footnotes":""},"categories":[6,1],"tags":[],"class_list":["post-1486","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-6","category-uncategorized"],"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v23.6 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>OGDI\u548csequenceTubeMap \u53ef\u89c6\u5316\u6cdb\u57fa\u56e0\u7ec4 - \u5c0f\u9a6c\u751f\u4fe1\u65e5\u8bb0<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"http:\/\/www.majunpeng.com\/index.php\/2025\/03\/20\/sequencetubemap-\u53ef\u89c6\u5316\u6cdb\u57fa\u56e0\u7ec4\/\" \/>\n<meta property=\"og:locale\" content=\"zh_CN\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"OGDI\u548csequenceTubeMap \u53ef\u89c6\u5316\u6cdb\u57fa\u56e0\u7ec4 - \u5c0f\u9a6c\u751f\u4fe1\u65e5\u8bb0\" \/>\n<meta property=\"og:description\" content=\"1. \u524d\u8a00 \u524d\u9762\u5df2\u7ecf\u4f7f\u7528PGGB\u6784\u5efa\u597d\u4e86\u6cdb\u57fa\u56e0\u7ec4\uff0c\u73b0\u5728\u5e94\u8be5\u8003\u8651\u5982\u4f55\u8fdb\u884c\u53ef\u89c6\u5316\u4e86\uff0c\u5bf9\u6bd4\u4e86\u51e0\u6b3e\u53ef\u89c6\u5316\u7684\u8f6f\u4ef6\uff0c\u6700\u540e\u9009 ... \u9605\u8bfb\u66f4\u591a\" \/>\n<meta property=\"og:url\" content=\"http:\/\/www.majunpeng.com\/index.php\/2025\/03\/20\/sequencetubemap-\u53ef\u89c6\u5316\u6cdb\u57fa\u56e0\u7ec4\/\" \/>\n<meta property=\"og:site_name\" content=\"\u5c0f\u9a6c\u751f\u4fe1\u65e5\u8bb0\" \/>\n<meta property=\"article:published_time\" content=\"2025-03-20T02:13:12+00:00\" \/>\n<meta property=\"article:modified_time\" content=\"2025-07-28T10:12:01+00:00\" \/>\n<meta property=\"og:image\" content=\"http:\/\/www.majunpeng.com\/wp-content\/uploads\/2025\/03\/header.png\" \/>\n\t<meta property=\"og:image:width\" content=\"1594\" \/>\n\t<meta property=\"og:image:height\" content=\"422\" \/>\n\t<meta property=\"og:image:type\" content=\"image\/png\" \/>\n<meta name=\"author\" content=\"majunpeng\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"\u4f5c\u8005\" \/>\n\t<meta name=\"twitter:data1\" content=\"majunpeng\" \/>\n\t<meta name=\"twitter:label2\" content=\"\u9884\u8ba1\u9605\u8bfb\u65f6\u95f4\" \/>\n\t<meta name=\"twitter:data2\" content=\"1 \u5206\" \/>\n<script type=\"application\/ld+json\" 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